Publikationen

2024

• Prediction of tumor board procedural recommendations using large language models

  Aubreville, M., Ganz, J., Ammeling, J., Rosbach, E., Gehrke, T., Scherzad, A., … Goncalves, M. (2024). Prediction of tumor board procedural recommendations using large language models. European Archives of Oto-Rhino-Laryngology. http://doi.org/10.1007/s00405-024-08947-9 (Original work published 2025)

  Abstract

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  Multidisciplinary tumor boards are meetings where a team of medical specialists, including medical oncologists, radiation oncologists, radiologists, surgeons, and pathologists, collaborate to determine the best treatment plan for cancer patients. While decision-making in this context is logistically and cost-intensive, it has a significant positive effect on overall cancer survival.

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  • Personenseiten

    • Aubreville, Marc

  • Abteilung/Einrichtung

    • FLAIR - Flensburg Artificial Intelligence Research

  • Profilbereich

    • Informatik und Gestaltung

  • Forschungsfeld

    • Digitalisierung im Gesundheitswesen
    • Data Science und Künstliche Intelligenz

  • Fachbereich

    • Fachbereich 3: Information und Kommunikation

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  • 2024
  • Journal Article
  • • Marc Aubreville
    • Jonathan Ganz
    • Jonas Ammeling
    • Emely Rosbach
    • Thomas Gehrke
    • Agmal Scherzad
    • Stephan Hackenberg
    • Miguel Goncalves

• Re-identification from histopathology images

  Ganz, J., Ammeling, J., Jabari, S., Breininger, K., & Aubreville, M. (2024). Re-identification from histopathology images. Medical Image Analysis, 103335. http://doi.org/10.1016/j.media.2024.103335 (Original work published 2025)

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  • Personenseiten

    • Aubreville, Marc

  • Abteilung/Einrichtung

    • FLAIR - Flensburg Artificial Intelligence Research

  • Forschungsfeld

    • Digitalisierung im Gesundheitswesen
    • Data Science und Künstliche Intelligenz

  • Fachbereich

    • Fachbereich 3: Information und Kommunikation

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  • 2024
  • Journal Article
  • • Jonathan Ganz
    • Jonas Ammeling
    • Samir Jabari
    • Katharina Breininger
    • Marc Aubreville

• Information mismatch in PHH3-assisted mitosis annotation leads to interpretation shifts in H&E slide analysis

  Ganz, J., Marzahl, C., Ammeling, J., Rosbach, E., Richter, B., Puget, C., … Aubreville, M. (2024). Information mismatch in PHH3-assisted mitosis annotation leads to interpretation shifts in H&E slide analysis. Scientific Reports, 14, 26273. http://doi.org/10.1038/s41598-024-77244-6

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  Abstract The count of mitotic figures (MFs) observed in hematoxylin and eosin (H&E)-stained slides is an important prognostic marker, as it is a measure for tumor cell proliferation. However, the identification of MFs has a known low inter-rater agreement. In a computer-aided setting, deep learning algorithms can help to mitigate this, but they require large amounts of annotated data for training and validation. Furthermore, label noise introduced during the annotation process may impede the algorithms’ performance. Unlike H&E, where identification of MFs is based mainly on morphological features, the mitosis-specific antibody phospho-histone H3 (PHH3) specifically highlights MFs. Counting MFs on slides stained against PHH3 leads to higher agreement among raters and has therefore recently been used as a ground truth for the annotation of MFs in H&E. However, as PHH3 facilitates the recognition of cells indistinguishable from H&E staining alone, the use of this ground truth could potentially introduce an interpretation shift and even label noise into the H&E-related dataset, impacting model performance. This study analyzes the impact of PHH3-assisted MF annotation on inter-rater reliability and object level agreement through an extensive multi-rater experiment. Subsequently, MF detectors, including a novel dual-stain detector, were evaluated on the resulting datasets to investigate the influence of PHH3-assisted labeling on the models’ performance. We found that the annotators’ object-level agreement significantly increased when using PHH3-assisted labeling (F1: 0.53 to 0.74). However, this enhancement in label consistency did not translate to improved performance for H&E-based detectors, neither during the training phase nor the evaluation phase. Conversely, the dual-stain detector was able to benefit from the higher consistency. This reveals an information mismatch between the H&E and PHH3-stained images as the cause of this effect, which renders PHH3-assisted annotations not well-aligned for use with H&E-based detectors. Based on our findings, we propose an improved PHH3-assisted labeling procedure.

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    • Aubreville, Marc

  • Forschungsprojekt

    • Robust and Accurate Multi-Tumor, Multi-Species, Multi-Laboratory and Multi-Scanner Mitosis Detection with Large-Scale Datasets and Artificial Intelligence

  • Abteilung/Einrichtung

    • FLAIR - Flensburg Artificial Intelligence Research
    • CIVU – Center for Interaction, Visualization and Usability

  • Profilbereich

    • Informatik und Gestaltung

  • Forschungsfeld

    • Human-Computer-Interaction
    • Data Science und Künstliche Intelligenz

  • Fachbereich

    • Fachbereich 3: Information und Kommunikation

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  • 2024
  • Journal Article
  • • Jonathan Ganz
    • Christian Marzahl
    • Jonas Ammeling
    • Emely Rosbach
    • Barbara Richter
    • Chloé Puget
    • Daniela Denk
    • Elena Demeter
    • Flaviu Tăbăran
    • Gabriel Wasinger
    • Karoline Lipnik
    • Marco Tecilla
    • Matthew Valentine
    • Michael Dark
    • Niklas Abele
    • Pompei Bolfa
    • Ramona Erber
    • Robert Klopfleisch
    • Sophie Merz
    • Taryn Donovan
    • Samir Jabari
    • Christof Bertram
    • Katharina Breininger
    • Marc Aubreville

• An Interdisciplinary Perspective on AI-Supported Decision Making in Medicine

  Ammeling, J., Aubreville, M., Fritz, A., Kießig, A., Krügel, S., & Uhl, M. (2024). An Interdisciplinary Perspective on AI-Supported Decision Making in Medicine. Technology in Society, 102791.

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  Exportformate

  • BibTeX
  • EndNote X3 XML
  • EndNote 7 XML
  • EndNote tagged
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  Weiterführende Links

  anzeigen ▸

  • Personenseiten

    • Aubreville, Marc

  • Forschungsprojekt

    • Robust and Accurate Multi-Tumor, Multi-Species, Multi-Laboratory and Multi-Scanner Mitosis Detection with Large-Scale Datasets and Artificial Intelligence

  • Abteilung/Einrichtung

    • FLAIR - Flensburg Artificial Intelligence Research
    • CIVU – Center for Interaction, Visualization and Usability

  • Profilbereich

    • Informatik und Gestaltung

  • Forschungsfeld

    • Data Science und Künstliche Intelligenz

  • Fachbereich

    • Fachbereich 3: Information und Kommunikation

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  • 2024
  • Journal Article
  • • Jonas Ammeling
    • Marc Aubreville
    • Alexis Fritz
    • Angelika Kießig
    • Sebastian Krügel
    • Matthias Uhl